Ulrich F. Muller

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Name: Müller, Uli; Ulrich F. Müller
Organization: University of California , USA
Department: Department of Chemistry and Biochemistry
Title: Associate(PhD)
Co-reporter:Arvin Akoopie and Ulrich F. Müller  
Physical Chemistry Chemical Physics 2016 vol. 18(Issue 30) pp:20118-20125
Publication Date(Web):07 Apr 2016
DOI:10.1039/C6CP00672H
The RNA world hypothesis describes a stage in the early evolution of life in which catalytic RNAs mediated the replication of RNA world organisms. One challenge to this hypothesis is that most existing ribozymes are much longer than what may be expected to originate from prebiotically plausible methods, or from the polymerization by currently existing polymerase ribozymes. We previously developed a 96-nucleotide long ribozyme, which generates a chemically activated 5′-phosphate (a 5′-triphosphate) from a prebiotically plausible molecule, trimetaphosphate, and an RNA 5′-hydroxyl group. Analogous ribozymes may have been important in the RNA world to access an energy source for the earliest life forms. Here we reduce the length of this ribozyme by fragmenting the ribozyme into multiple RNA strands, and by successively removing its longest double strand. The resulting ribozyme is composed of RNA fragments with none longer than 34 nucleotides. The temperature optimum was ∼20 °C, compared to ∼40 °C for the parent ribozyme. This shift in temperature dependence may be a more general phenomenon for fragmented ribozymes, and may have helped RNA world organisms to emerge at low temperature.
Co-reporter: Ulrich F. Müller; Yitzhak Tor
Angewandte Chemie International Edition 2014 Volume 53( Issue 21) pp:5245-5247
Publication Date(Web):
DOI:10.1002/anie.201400847
Co-reporter: Ulrich F. Müller; Yitzhak Tor
Angewandte Chemie 2014 Volume 126( Issue 21) pp:5346-5348
Publication Date(Web):
DOI:10.1002/ange.201400847
Co-reporter:Ulrich F. Müller
Chemistry & Biology 2009 Volume 16(Issue 8) pp:797-798
Publication Date(Web):28 August 2009
DOI:10.1016/j.chembiol.2009.08.001
Ribozymes (catalytic RNAs) were the center of a presumed RNA world in the early origin of life. In this issue, Lau and Unrau show evidence that an RNA world could have used a similar evolutionary pathway as most proteins do.
Co-reporter:Arvin Akoopie and Ulrich F. Müller
Physical Chemistry Chemical Physics 2016 - vol. 18(Issue 30) pp:NaN20125-20125
Publication Date(Web):2016/04/07
DOI:10.1039/C6CP00672H
The RNA world hypothesis describes a stage in the early evolution of life in which catalytic RNAs mediated the replication of RNA world organisms. One challenge to this hypothesis is that most existing ribozymes are much longer than what may be expected to originate from prebiotically plausible methods, or from the polymerization by currently existing polymerase ribozymes. We previously developed a 96-nucleotide long ribozyme, which generates a chemically activated 5′-phosphate (a 5′-triphosphate) from a prebiotically plausible molecule, trimetaphosphate, and an RNA 5′-hydroxyl group. Analogous ribozymes may have been important in the RNA world to access an energy source for the earliest life forms. Here we reduce the length of this ribozyme by fragmenting the ribozyme into multiple RNA strands, and by successively removing its longest double strand. The resulting ribozyme is composed of RNA fragments with none longer than 34 nucleotides. The temperature optimum was ∼20 °C, compared to ∼40 °C for the parent ribozyme. This shift in temperature dependence may be a more general phenomenon for fragmented ribozymes, and may have helped RNA world organisms to emerge at low temperature.
3-Pyridinecarboxylic acid, 6-[2-(1-methylethylidene)hydrazinyl]-, 2,5-dioxo-1-pyrrolidinyl ester
2-Propenoic acid, 2-methyl-, 2-(2-bromo-2-methyl-1-oxopropoxy)ethyl ester, homopolymer
Quinolinium,1,1'-[1,3-propanediylbis[(dimethyliminio)-3,1-propanediyl]]bis[4-[(3-methyl-2(3H)-benzoxazolylidene)methyl]-,iodide (1:4)
Poly(oxy-1,2-ethanediyl),a-(1-oxo-2-propen-1-yl)-w-methoxy-
Mitogen-activated protein kinase p38
b-Alanine, N,N-dimethyl-,(3R,4aR,5S,6S,6aS,10S,10aR,10bS)-5-(acetyloxy)-3-ethenyldodecahydro-10,10b-dihydroxy-3,4a,7,7,10a-pentamethyl-1-oxo-1H-naphtho[2,1-b]pyran-6-ylester, hydrochloride (1:1)